CHIC2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHIC2 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,700 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible CHIC2-associated proteins across cancer lineages are MALSU1, VCL, and MRPL24. Each is linked with CHIC2 in more than 4 cancer types. Because this analysis shows association rather than direction, both CHIC2-to-partner and partner-to-CHIC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHIC2 versus MALSU1 in OV, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHIC2→partner) and Y-score (partner→CHIC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVMALSU1 →-0.501-0.665.002<.00135
CCRCCVCL →+0.463+0.288<.001<.00135
PDACMRPL24 →-0.356-0.258<.001.00535
COADPMPCA →-0.371-0.336<.001<.00134
PDACPPM1F →+0.311+0.336<.001<.00134
CCRCCPYCR2 →-0.504-0.272.002.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,700 associations by consensus.

CHIC2 vs MALSU1 — OV

Per-sample scatter of CHIC2 vs MALSU1 in OV (Pearson r = -0.37).

Explore this scatter interactively →

Exploration