CHD5

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHD5 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,442 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CHD5-associated proteins across cancer lineages are CD55, EIF4G1, and GNB1. Each is linked with CHD5 in more than 2 cancer types. Because this analysis shows association rather than direction, both CHD5-to-partner and partner-to-CHD5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHD5 versus CD55 in GBM, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHD5→partner) and Y-score (partner→CHD5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCD55 →+0.523+1.665<.001<.00133
GBMEIF4G1 →-0.210-1.228<.001<.00133
GBMGNB1 →+0.530+1.045<.001<.00133
CCRCCHOPX →+0.651+0.117<.001.00233
GBMSEPTIN4 →+0.577+1.081<.001<.00133
PDACSEPTIN4_S325 →+0.538+0.319.003<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,442 associations by consensus.

CHD5 vs CD55 — GBM

Per-sample scatter of CHD5 vs CD55 in GBM (Pearson r = 0.37).

Explore this scatter interactively →

Exploration