Across TCGA patient cohorts, CHCHD2P9 mutation is significantly associated with the RNA expression of many other genes, with 127 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible CHCHD2P9-associated genes across cancer lineages are SQSTM1P1, LINC02559, and MIR550A1. Each is linked with CHCHD2P9 in more than 1 cancer types. Because this analysis shows association rather than direction, both CHCHD2P9-to-partner and partner-to-CHCHD2P9 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHCHD2P9→partner) and Y-score (partner→CHCHD2P9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	SQSTM1P1 →	+0.085	+7.315	.005	<.001	3	2
SKCM	LINC02559 →	+0.113	+4.624	<.001	.005	3	2
UCEC	MIR550A1 →	+0.554	+4.184	.002	.003	3	2
UCEC	RN7SL401P →	+0.181	+4.352	<.001	.008	3	2
SKCM	FAM149B1P1 →	+0.069	+4.141	<.001	.002	3	2
COAD	NPM1P10 →	+0.210	+5.435	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 127 associations by consensus.

Exploration

CHCHD2P9 survival (RNA) · tumor vs normal (RNA) · all CHCHD2P9 data types