CGREF1

Across TCGA cell cohorts, CGREF1 RNA expression is significantly associated with the RNA expression of many other genes, with 7,980 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CGREF1-associated genes across cancer lineages are ABHD1, PODXL2, and PNMA6A. Each is linked with CGREF1 in more than 11 cancer types. Because this analysis shows association rather than direction, both CGREF1-to-partner and partner-to-CGREF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CGREF1 versus ABHD1 in OESOPHAGUS, with a Pearson correlation of 0.38.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CGREF1→partner) and Y-score (partner→CGREF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	ABHD1 →	+0.950	+2.935	.001	<.001	1	12
BLOOD_Myeloma	PODXL2 →	+3.004	+2.409	<.001	.003	3	10
STOMACH	PNMA6A →	+2.009	+2.932	.001	<.001	3	9
LUNG_SCLC	LRFN1 →	+1.789	+2.366	<.001	<.001	3	8
STOMACH	GAREM2 →	+1.445	+2.510	.001	<.001	3	7
KIDNEY	PTP4A3 →	+1.862	+2.049	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,980 associations by consensus.

CGREF1 vs ABHD1 — OESOPHAGUS

Explore this scatter interactively →