CGN

Across TCGA patient cohorts, CGN RNA expression is significantly associated with the protein abundance of many other proteins, with 13,211 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible CGN-associated proteins across cancer lineages are CGN_S155, CGN_S165, and CGN_S120. Each is linked with CGN in more than 8 cancer types. Because this analysis shows association rather than direction, both CGN-to-partner and partner-to-CGN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CGN versus CGN_S155 in HNSC, with a Pearson correlation of 0.78.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CGN→partner) and Y-score (partner→CGN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CGN_S155 →	+0.931	+1.210	<.001	<.001	3	9
BRCA	CGN_S165 →	+1.225	+1.450	<.001	<.001	3	9
LSCC	CGN_S120 →	+1.117	+1.206	<.001	<.001	3	7
BRCA	CGN_S338 →	+1.310	+1.070	<.001	<.001	3	7
BRCA	CGN_S96 →	+1.178	+2.047	<.001	<.001	3	7
BRCA	LLGL2 →	+0.547	+1.005	<.001	.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,211 associations by consensus.

CGN vs CGN_S155 — HNSC

Explore this scatter interactively →