CGGBP1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CGGBP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,902 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible CGGBP1-associated proteins across cancer lineages are NOVA2, PPIF, and RBM15B. Each is linked with CGGBP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CGGBP1-to-partner and partner-to-CGGBP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CGGBP1 versus NOVA2 in PDAC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CGGBP1→partner) and Y-score (partner→CGGBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACNOVA2 →+0.653+0.332.001<.00134
HNSCPPIF →-0.396-0.561.001.00334
GBMRBM15B →+0.250+0.491.003<.00134
HNSCZNF654 →+0.455+0.372.001.00834
BRCAAPPL1 →+0.234+0.502.001<.00134
GBMRPL14 →-0.501-0.431<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,902 associations by consensus.

CGGBP1 vs NOVA2 — PDAC

Per-sample scatter of CGGBP1 vs NOVA2 in PDAC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration