CFP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CFP RNA expression is significantly associated with the go_rna of many other GO terms, with 3,663 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CFP-associated GO terms across cancer lineages are Positive regulation of intracellular steroid hormone receptor signaling pathway, Negative regulation of translational initiation, and Regulation of telomere maintenance via telomerase. Each is linked with CFP in more than 9 cancer types. Because this analysis shows association rather than direction, both CFP-to-partner and partner-to-CFP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of intracellular steroid hormone receptor signaling pathway grouped by CFP-low versus CFP-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CFP→partner) and Y-score (partner→CFP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEPositive regulation of intracellular steroid hormone receptor signaling pathway →+0.174+0.552<.001.003310
SOFT_TISSUENegative regulation of translational initiation →+0.090+0.367<.001.003310
UPPER_AERODIGESTIVE_TRACTRegulation of telomere maintenance via telomerase →+0.059+0.259.003.003310
BONESubtelomeric heterochromatin formation →+0.149+0.587<.001.00139
SOFT_TISSUERegulation of RNA splicing →+0.089+0.273<.001<.00139
BLOOD_MyelomaRegulation of chromosome segregation →+0.084+0.741.004.00739
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,663 associations by consensus.

Positive regulation of intracellular steroid hormone receptor signaling pathway by CFP expression — BONE

Box plot of Positive regulation of intracellular steroid hormone receptor signaling pathway in CFP-low vs CFP-high samples in BONE.

Explore this box plot interactively →

Exploration