CFHR4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CFHR4 RNA expression is significantly associated with the go_rna of many other GO terms, with 517 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible CFHR4-associated GO terms across cancer lineages are Gamma-aminobutyric acid signaling pathway, Connective tissue development, and Regulation of dephosphorylation. Each is linked with CFHR4 in more than 4 cancer types. Because this analysis shows association rather than direction, both CFHR4-to-partner and partner-to-CFHR4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Gamma-aminobutyric acid signaling pathway grouped by CFHR4-low versus CFHR4-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CFHR4→partner) and Y-score (partner→CFHR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHGamma-aminobutyric acid signaling pathway →-0.229-0.099.005.00935
CNSConnective tissue development →-0.039-0.124.003.00634
BREASTRegulation of dephosphorylation →+0.061+0.081<.001.00834
LUNG_SCLCRegulation of respiratory gaseous exchange →+0.123+0.088.003.00733
OESOPHAGUSActivation of meiosis →+1.042+0.160.002.00433
CNSTranscription by RNA polymerase I →+0.053+0.076.004.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 517 associations by consensus.

Gamma-aminobutyric acid signaling pathway by CFHR4 expression — STOMACH

Box plot of Gamma-aminobutyric acid signaling pathway in CFHR4-low vs CFHR4-high samples in STOMACH.

Explore this box plot interactively →

Exploration