CFDP1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CFDP1 mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CFDP1-associated genes across cancer lineages are Ku80, p62 Lck ligand, and AMPK_pT172. Each is linked with CFDP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CFDP1-to-partner and partner-to-CFDP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by CFDP1-low versus CFDP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CFDP1→partner) and Y-score (partner→CFDP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.312+3.183.016.01031
UCECp62 Lck ligand →+0.502+3.169.004.02031
UCECAMPK_pT172 →+0.471+3.000.037.03631
UCECPCNA →+0.338+3.000.004.03621
UCECERK2 →+0.230+3.169.030.02011
UCECPRDX1 →+0.341+3.169.002.02011
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Ku80 by CFDP1 expression — UCEC

Box plot of Ku80 in CFDP1-low vs CFDP1-high samples in UCEC.

Explore this box plot interactively →

Exploration