CFDP1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CFDP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,969 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CFDP1-associated GO terms across cancer lineages are RNA splicing, via transesterification reactions, RNA splicing, via transesterification reactions with bulged adenosine as nucleophile, and mRNA splicing, via spliceosome. Each is linked with CFDP1 in more than 8 cancer types. Because this analysis shows association rather than direction, both CFDP1-to-partner and partner-to-CFDP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA splicing, via transesterification reactions grouped by CFDP1-low versus CFDP1-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CFDP1→partner) and Y-score (partner→CFDP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUERNA splicing, via transesterification reactions →+0.055+0.550.004.00939
SOFT_TISSUERNA splicing, via transesterification reactions with bulged adenosine as nucleophile →+0.055+0.550.004.00939
SOFT_TISSUEmRNA splicing, via spliceosome →+0.055+0.550.004.00939
SOFT_TISSUENegative regulation of stem cell population maintenance →+0.059+0.590<.001<.00138
BLOOD_LymphomaPositive regulation of DNA metabolic process →+0.041+0.730<.001<.00138
SOFT_TISSUETranscription preinitiation complex assembly →+0.069+0.673.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,969 associations by consensus.

RNA splicing, via transesterification reactions by CFDP1 expression — SOFT_TISSUE

Box plot of RNA splicing, via transesterification reactions in CFDP1-low vs CFDP1-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration