CFD

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, CFD mass-spec protein is linked to patient survival in 5 of 34 cancer types, making it a survival-associated CFD data layer compared with 28 for mass-spec protein and 1 for mutation status.

The strongest signal is observed in colon adenocarcinoma (COAD), where higher CFD mass-spec protein is associated with worse disease-free survival. In most high-consensus cancer types, elevated CFD expression acts as an unfavorable survival marker.

COAD, LSCC, and LUAD are the cancer types where CFD mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
COADDFSMedianAll0.8861.000.02018view →
LSCCDFSMedianII,III,IV0.8381.000.00611view →
LUADDFSTertileIII,IV0.3780.944.00110view →
HNSCOSMedianII,III,IV0.9531.000.0194view →
GBMOSMedianAll0.2830.506.0381view →
Pink = unfavorable, green = favorable. Showing the 5 strongest of 5 lineages.

Exploration