CFC1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CFC1 protein abundance is significantly associated with the RNA expression of many other genes, with 1,069 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible CFC1-associated genes across cancer lineages are SLC46A3, PIF1, and TLR3. Each is linked with CFC1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CFC1-to-partner and partner-to-CFC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CFC1 versus SLC46A3 in UCEC, with a Pearson correlation of -0.63.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CFC1→partner) and Y-score (partner→CFC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSLC46A3 →-1.216-0.939.003<.00132
UCECPIF1 →+1.630+0.898.004.00232
UCECTLR3 →-1.147-0.725.009<.00132
UCECEHMT2 →+0.958+0.775.009.00132
UCECLY6G5B →+0.755+0.867<.001<.00132
UCECKIF1B →+0.727+0.645.003.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,069 associations by consensus.

CFC1 vs SLC46A3 — UCEC

Per-sample scatter of CFC1 vs SLC46A3 in UCEC (Pearson r = -0.63).

Explore this scatter interactively →

Exploration