CFAP44-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CFAP44-AS1 RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of CFAP44-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where CFAP44-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types CFAP44-AS1 is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

KICH, BRCA, and CHOL are the cancer types where CFAP44-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CFAP44-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHMaleAll−0.099<.0019view →
BRCAAllAll+0.146.0224view →
CHOLAllII,III,IV+0.315.0153view →
BLCAAllAll+0.141.0133view →
KIRPAllAll+0.116.0022view →
LIHCAllAll+0.027.0072view →
THCAMaleIII,IV−0.084.0151view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

CFAP44-AS1–KICH

Tumor-vs-normal expression box plot for CFAP44-AS1 RNA in KICH.

Open the KICH breakdown →

Exploration