CFAP300

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CFAP300 protein abundance is significantly associated with the RNA expression of many other genes, with 5,529 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible CFAP300-associated genes across cancer lineages are USP14, CEP76, and GUCY2F. Each is linked with CFAP300 in more than 1 cancer types. Because this analysis shows association rather than direction, both CFAP300-to-partner and partner-to-CFAP300 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CFAP300 versus USP14 in UCEC, with a Pearson correlation of -0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CFAP300→partner) and Y-score (partner→CFAP300) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECUSP14 →-0.766-0.690.002.00631
UCECCEP76 →-0.698-0.796.007<.00131
UCECGUCY2F →+0.895+0.789<.001.00631
UCECCCDC113 →+1.616+0.724<.001.00431
UCECGIPR →+1.099+0.860.003.00431
UCECNAMPT →-0.513-0.497.009.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,529 associations by consensus.

CFAP300 vs USP14 — UCEC

Per-sample scatter of CFAP300 vs USP14 in UCEC (Pearson r = -0.47).

Explore this scatter interactively →

Exploration