CFAP20DC-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CFAP20DC-AS1 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of CFAP20DC-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where CFAP20DC-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CFAP20DC-AS1 is over-expressed in tumor, although a few such as COAD show the opposite, repressed pattern.

KIRC, LIHC, and KIRP are the cancer types where CFAP20DC-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CFAP20DC-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+0.062<.00110view →
LIHCMaleAll+0.153<.0016view →
KIRPAllAll+0.022.0036view →
LUSCAllAll+0.016.0015view →
BRCAAllAll+0.071.0422view →
COADMaleII,III,IV−0.047.0242view →
CHOLAllAll+0.094.0481view →
HNSCAllAll+0.007.0461view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

CFAP20DC-AS1–KIRC

Tumor-vs-normal expression box plot for CFAP20DC-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration