CETP

Across TCGA patient cohorts, CETP RNA expression is significantly associated with the protein abundance of many other proteins, with 10,318 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CETP-associated proteins across cancer lineages are HLA-F, PSMB9, and GBP4. Each is linked with CETP in more than 9 cancer types. Because this analysis shows association rather than direction, both CETP-to-partner and partner-to-CETP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CETP versus HLA-F in HNSC, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CETP→partner) and Y-score (partner→CETP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	HLA-F →	+0.838	+0.544	<.001	.005	3	10
OV	PSMB9 →	+0.630	+0.942	<.001	<.001	3	9
HNSC	GBP4 →	+0.912	+0.927	<.001	<.001	3	9
HNSC	GBP5 →	+1.152	+0.539	<.001	<.001	3	9
HNSC	GIMAP8 →	+0.564	+0.644	<.001	<.001	3	9
UCEC	APOL3 →	+0.945	+0.759	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,318 associations by consensus.

CETP vs HLA-F — HNSC

Explore this scatter interactively →