CEP19

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CEP19 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,651 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CEP19-associated proteins across cancer lineages are UBXN7, LSG1, and MCM2. Each is linked with CEP19 in more than 4 cancer types. Because this analysis shows association rather than direction, both CEP19-to-partner and partner-to-CEP19 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CEP19 versus UBXN7 in LSCC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CEP19→partner) and Y-score (partner→CEP19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCUBXN7 →+0.489+0.774<.001<.00135
LSCCLSG1 →+0.429+0.929<.001<.00135
GBMMCM2 →+0.575+0.469.003<.00135
LSCCPCYT1A →+0.565+0.774<.001<.00135
LSCCGMPS →+0.497+0.971<.001<.00135
LSCCHLTF →+0.430+0.659<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,651 associations by consensus.

CEP19 vs UBXN7 — LSCC

Per-sample scatter of CEP19 vs UBXN7 in LSCC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration