CELSR2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CELSR2 mutation is significantly associated with the RNA expression of many other genes, with 1,244 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CELSR2-associated genes across cancer lineages are LYG1, DESI1, and PXYLP1. Each is linked with CELSR2 in more than 3 cancer types. Because this analysis shows association rather than direction, both CELSR2-to-partner and partner-to-CELSR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LYG1 grouped by CELSR2-low versus CELSR2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CELSR2→partner) and Y-score (partner→CELSR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINELYG1 →+0.877+2.290<.001<.00134
LARGE_INTESTINEDESI1 →+0.555+2.700<.001<.00133
BLOOD_LeukemiaPXYLP1 →+1.265+2.489.001.00733
LARGE_INTESTINEHSPA4L →+1.000+3.169<.001.00633
LARGE_INTESTINEME2 →+0.972+2.222<.001.00133
BLOOD_LeukemiaPNLDC1 →+0.109+2.727.006.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,244 associations by consensus.

LYG1 by CELSR2 expression — LARGE_INTESTINE

Box plot of LYG1 in CELSR2-low vs CELSR2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration