CELF1

Across TCGA patient cohorts, CELF1 protein abundance is significantly associated with the RNA expression of many other genes, with 17,441 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CELF1-associated genes across cancer lineages are CKAP5, SSRP1, and MSH2. Each is linked with CELF1 in more than 8 cancer types. Because this analysis shows association rather than direction, both CELF1-to-partner and partner-to-CELF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CELF1 versus CKAP5 in COAD, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CELF1→partner) and Y-score (partner→CELF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	CKAP5 →	+0.652	+0.257	<.001	<.001	3	9
LSCC	SSRP1 →	+0.633	+0.307	<.001	<.001	3	8
LSCC	MSH2 →	+0.897	+0.361	<.001	<.001	3	8
GBM	LIG1 →	+0.683	+0.319	<.001	<.001	3	7
HNSC	CEP72 →	+0.772	+0.204	.006	.006	2	8
LSCC	XPO5 →	+0.759	+0.284	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,441 associations by consensus.

CELF1 vs CKAP5 — COAD

Explore this scatter interactively →