CELF1

Across TCGA patient cohorts, CELF1 mutation is significantly associated with the RNA expression of many other genes, with 2,216 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CELF1-associated genes across cancer lineages are RNA5SP419, RNU7-97P, and LINC02304. Each is linked with CELF1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CELF1-to-partner and partner-to-CELF1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP419 grouped by CELF1-low versus CELF1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CELF1→partner) and Y-score (partner→CELF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNA5SP419 →	+0.475	+2.077	.001	.003	3	3
LIHC	RNU7-97P →	+0.683	+5.033	<.001	.009	3	2
BLCA	LINC02304 →	+0.122	+6.147	<.001	.002	3	2
SKCM	MTCYBP40 →	+0.024	+4.495	<.001	.007	3	2
SKCM	RN7SL435P →	+0.073	+4.282	.002	.009	3	2
SKCM	MIR320B1 →	+0.432	+3.875	<.001	.006	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,216 associations by consensus.

RNA5SP419 by CELF1 expression — UCEC

Explore this box plot interactively →