CDT1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDT1 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDT1-associated genes across cancer lineages are eIF4E, Caspase-7-cleavedD198, and Rad50. Each is linked with CDT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDT1-to-partner and partner-to-CDT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by CDT1-low versus CDT1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDT1→partner) and Y-score (partner→CDT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.191+3.013.033.01833
UCECCaspase-7-cleavedD198 →+0.761+3.341.002.00533
UCECRad50 →-0.213-1.700.038.04432
UCECA-Raf_pS299 →-0.211-3.584<.001.00231
UCECERK2 →+0.227+3.321.005.01031
UCECFOXO3a_pS318_S321 →-0.164-2.212.001.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

eIF4E by CDT1 expression — UCEC

Box plot of eIF4E in CDT1-low vs CDT1-high samples in UCEC.

Explore this box plot interactively →

Exploration