CDS1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,361 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CDS1-associated GO terms across cancer lineages are Negative regulation of Arp2/3 complex-mediated actin nucleation, Establishment of epithelial cell apical/basal polarity, and Positive regulation of endothelial cell development. Each is linked with CDS1 in more than 11 cancer types. Because this analysis shows association rather than direction, both CDS1-to-partner and partner-to-CDS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of Arp2/3 complex-mediated actin nucleation grouped by CDS1-low versus CDS1-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CDS1→partner) and Y-score (partner→CDS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNegative regulation of Arp2/3 complex-mediated actin nucleation →+0.190+1.997<.001<.001312
LUNG_NSCLC_LUSCEstablishment of epithelial cell apical/basal polarity →-0.236-1.806<.001<.001311
URINARY_TRACTPositive regulation of endothelial cell development →+0.256+2.413<.001<.001311
OVARYProtein localization to bicellular tight junction →+0.137+1.685<.001<.001311
URINARY_TRACTPositive regulation of establishment of endothelial barrier →+0.256+2.413<.001<.001311
OVARYBundle of His cell to Purkinje myocyte communication →+0.367+2.088.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,361 associations by consensus.

Negative regulation of Arp2/3 complex-mediated actin nucleation by CDS1 expression — STOMACH

Box plot of Negative regulation of Arp2/3 complex-mediated actin nucleation in CDS1-low vs CDS1-high samples in STOMACH.

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Exploration