CDRT1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDRT1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,182 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CDRT1-associated GO terms across cancer lineages are Glial cell migration, Regulation of tumor necrosis factor-mediated signaling pathway, and Regulation of type I interferon-mediated signaling pathway. Each is linked with CDRT1 in more than 11 cancer types. Because this analysis shows association rather than direction, both CDRT1-to-partner and partner-to-CDRT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Glial cell migration grouped by CDRT1-low versus CDRT1-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CDRT1→partner) and Y-score (partner→CDRT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEGlial cell migration →+0.138+0.924.002.001312
BONERegulation of tumor necrosis factor-mediated signaling pathway →+0.080+1.307<.001<.001312
LUNG_SCLCRegulation of type I interferon-mediated signaling pathway →+0.102+0.901<.001<.001312
LIVERCellular response to abiotic stimulus →+0.047+2.663.001.001311
LUNG_NSCLC_LUADCerebral cortex radially oriented cell migration →+0.151+1.703<.001<.001311
LARGE_INTESTINECerebral cortex radial glia-guided migration →+0.162+1.386<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,182 associations by consensus.

Glial cell migration by CDRT1 expression — BONE

Box plot of Glial cell migration in CDRT1-low vs CDRT1-high samples in BONE.

Explore this box plot interactively →

Exploration