Across TCGA pan-cancer cohorts, CDKN2AIPNL mass-spec protein differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of CDKN2AIPNL’s most consistent transcriptional readouts.
The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where CDKN2AIPNL mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types CDKN2AIPNL is over-expressed in tumor, although a few such as PDAC show the opposite, repressed pattern.
CCRCC, LSCC, and HNSC are the cancer types where CDKN2AIPNL tumor–normal differential expression is most reproducible.