CDK6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDK6 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDK6-associated genes across cancer lineages are eIF4E, STAT3_pY705, and EGFR_pY1068. Each is linked with CDK6 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDK6-to-partner and partner-to-CDK6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by CDK6-low versus CDK6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK6→partner) and Y-score (partner→CDK6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.201+3.472.007.00232
UCECSTAT3_pY705 →-0.329-1.700<.001.04032
UCECEGFR_pY1068 →-0.223-1.362.012.03731
UCECFOXO3a_pS318_S321 →-0.130-2.492.003.00131
UCECACC1 →+0.252+2.183.049.03331
UCECAcetyl-a-Tubulin-Lys40 →+0.373+2.009.037.01731
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

eIF4E by CDK6 expression — UCEC

Box plot of eIF4E in CDK6-low vs CDK6-high samples in UCEC.

Explore this box plot interactively →

Exploration