CDK5RAP1

Across TCGA patient cohorts, CDK5RAP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,508 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDK5RAP1-associated proteins across cancer lineages are CTNNBL1, TRMT6, and TOP1. Each is linked with CDK5RAP1 in more than 7 cancer types. Because this analysis shows association rather than direction, both CDK5RAP1-to-partner and partner-to-CDK5RAP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDK5RAP1 versus CTNNBL1 in GBM, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK5RAP1→partner) and Y-score (partner→CDK5RAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CTNNBL1 →	+0.350	+0.413	<.001	<.001	3	8
LSCC	TRMT6 →	+0.389	+0.467	<.001	<.001	3	8
COAD	TOP1 →	+0.431	+0.562	<.001	<.001	3	7
GBM	ADNP →	+0.353	+0.371	<.001	<.001	3	7
PDAC	CSTF1 →	+0.220	+0.279	<.001	<.001	3	7
GBM	CSTF3 →	+0.246	+0.367	.002	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,508 associations by consensus.

CDK5RAP1 vs CTNNBL1 — GBM

Explore this scatter interactively →