CDK19

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDK19 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CDK19-associated genes across cancer lineages are OR8H2, DPRX, and MTRNR2L10. Each is linked with CDK19 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDK19-to-partner and partner-to-CDK19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR8H2 grouped by CDK19-low versus CDK19-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK19→partner) and Y-score (partner→CDK19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSOR8H2 →+0.023+6.357<.001<.00131
CNSDPRX →+0.068+5.321<.001.00531
CNSMTRNR2L10 →+0.016+6.357<.001<.00131
LARGE_INTESTINESH3GL2 →+1.159+3.252.003.00931
LARGE_INTESTINEPTH2R →+0.851+2.716<.001.00931
LARGE_INTESTINETECRL →+0.011+3.240<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

OR8H2 by CDK19 expression — CNS

Box plot of OR8H2 in CDK19-low vs CDK19-high samples in CNS.

Explore this box plot interactively →

Exploration