CDK17

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDK17 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,970 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CDK17-associated proteins across cancer lineages are PPP1R12A, TBRG4, and TMX2. Each is linked with CDK17 in more than 4 cancer types. Because this analysis shows association rather than direction, both CDK17-to-partner and partner-to-CDK17 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDK17 versus PPP1R12A in COAD, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK17→partner) and Y-score (partner→CDK17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPPP1R12A →+0.345+0.392<.001.00235
COADTBRG4 →-0.417-0.436<.001<.00134
COADTMX2 →-0.465-0.507<.001<.00134
OVTRAP1 →-0.491-0.371<.001<.00134
COADTRMT10C →-0.429-0.453<.001<.00134
BRCATSC22D3 →+0.541+0.955<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,970 associations by consensus.

CDK17 vs PPP1R12A — COAD

Per-sample scatter of CDK17 vs PPP1R12A in COAD (Pearson r = 0.33).

Explore this scatter interactively →

Exploration