CDK13

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDK13 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,477 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CDK13-associated GO terms across cancer lineages are Endosomal transport, Macroautophagy, and Protein polyubiquitination. Each is linked with CDK13 in more than 15 cancer types. Because this analysis shows association rather than direction, both CDK13-to-partner and partner-to-CDK13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by CDK13-low versus CDK13-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK13→partner) and Y-score (partner→CDK13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSEndosomal transport →+0.071+1.017<.001<.001316
OESOPHAGUSMacroautophagy →+0.086+1.112<.001.001316
OESOPHAGUSProtein polyubiquitination →+0.057+0.980<.001<.001316
OESOPHAGUSRegulation of RNA splicing →+0.082+0.984.001.001316
KIDNEYRetrograde transport, endosome to Golgi →+0.087+0.698.001.004316
BONEPositive regulation of DNA recombination →+0.109+1.007<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,477 associations by consensus.

Endosomal transport by CDK13 expression — OESOPHAGUS

Box plot of Endosomal transport in CDK13-low vs CDK13-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration