CDK1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDK1 mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDK1-associated genes across cancer lineages are EGFR_pY1068, ERK2, and Fibronectin. Each is linked with CDK1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDK1-to-partner and partner-to-CDK1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by CDK1-low versus CDK1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDK1→partner) and Y-score (partner→CDK1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.282-3.169.040.02031
UCECERK2 →+0.298+3.169.004.02031
UCECFibronectin →-0.384-3.160.034.01931
UCECPCNA →+0.254+3.169.032.02021
UCECTuberin →+0.335+2.817.023.03621
UCECNotch1 →+0.198+3.169.010.02011
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

EGFR_pY1068 by CDK1 expression — UCEC

Box plot of EGFR_pY1068 in CDK1-low vs CDK1-high samples in UCEC.

Explore this box plot interactively →

Exploration