CDIPT

Across TCGA patient cohorts, CDIPT protein abundance is significantly associated with the RNA expression of many other genes, with 19,563 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDIPT-associated genes across cancer lineages are PBXIP1, NXPH3, and CDCA2. Each is linked with CDIPT in more than 4 cancer types. Because this analysis shows association rather than direction, both CDIPT-to-partner and partner-to-CDIPT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDIPT versus PBXIP1 in GBM, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDIPT→partner) and Y-score (partner→CDIPT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PBXIP1 →	+0.590	+0.271	.004	.004	3	5
BRCA	NXPH3 →	+1.028	+0.531	.001	.001	3	4
OV	CDCA2 →	-1.231	-0.498	<.001	.001	3	4
OV	YPEL3 →	+0.842	+0.548	<.001	.001	3	4
LSCC	CD2BP2 →	+0.409	+0.260	<.001	<.001	3	4
BRCA	MAGED2 →	+0.892	+0.512	.006	.005	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,563 associations by consensus.

CDIPT vs PBXIP1 — GBM

Explore this scatter interactively →