CDHR1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDHR1 protein abundance is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDHR1-associated genes across cancer lineages are CHMP2B, EDDM3B, and CKLF. Each is linked with CDHR1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDHR1-to-partner and partner-to-CDHR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDHR1 versus CHMP2B in LSCC, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDHR1→partner) and Y-score (partner→CDHR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCHMP2B →-0.620-0.333.004<.00121
LSCCEDDM3B →-0.368-0.943.002.00611
LSCCCKLF →-0.705-0.980.008.00811
LSCCLINC02062 →-0.388-0.963.005.00711
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

CDHR1 vs CHMP2B — LSCC

Per-sample scatter of CDHR1 vs CHMP2B in LSCC (Pearson r = -0.38).

Explore this scatter interactively →

Exploration