CDH7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH7 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,033 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CDH7-associated proteins across cancer lineages are BICD2, CA12, and ABCC1. Each is linked with CDH7 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDH7-to-partner and partner-to-CDH7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDH7 versus BICD2 in LSCC, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH7→partner) and Y-score (partner→CDH7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCBICD2 →-0.497-0.089<.001<.00133
LSCCCA12 →-1.130-0.093<.001.00532
LSCCABCC1 →-0.765-0.058<.001.00532
GBMCRYM →+0.900+0.470<.001.00332
LSCCFOSL2_S200 →-0.574-0.097<.001.00432
LSCCFOSL2_S230 →-0.774-0.074<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,033 associations by consensus.

CDH7 vs BICD2 — LSCC

Per-sample scatter of CDH7 vs BICD2 in LSCC (Pearson r = -0.32).

Explore this scatter interactively →

Exploration