CDH7

Across TCGA patient cohorts, CDH7 protein abundance is significantly associated with the RNA expression of many other genes, with 866 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CDH7-associated genes across cancer lineages are SNRPD3, CYTH4, and RBM23. Each is linked with CDH7 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDH7-to-partner and partner-to-CDH7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDH7 versus SNRPD3 in GBM, with a Pearson correlation of 0.72.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH7→partner) and Y-score (partner→CDH7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SNRPD3 →	+0.714	+1.426	<.001	.004	3	1
GBM	CYTH4 →	-1.011	-0.850	.004	.005	3	1
GBM	RBM23 →	+0.438	+1.083	.005	.009	3	1
GBM	PRMT5 →	+0.512	+0.821	.002	.007	3	1
GBM	AP4S1 →	+0.536	+0.801	.004	.009	3	1
GBM	POLE2 →	+0.943	+0.919	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 866 associations by consensus.

CDH7 vs SNRPD3 — GBM

Explore this scatter interactively →