CDH2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDH2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,375 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CDH2-associated GO terms across cancer lineages are Neuroligin clustering involved in postsynaptic membrane assembly, Positive regulation of stress fiber assembly, and Establishment of Golgi localization. Each is linked with CDH2 in more than 18 cancer types. Because this analysis shows association rather than direction, both CDH2-to-partner and partner-to-CDH2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Neuroligin clustering involved in postsynaptic membrane assembly grouped by CDH2-low versus CDH2-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH2→partner) and Y-score (partner→CDH2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASNeuroligin clustering involved in postsynaptic membrane assembly →+1.963+3.525<.001<.001319
BONEPositive regulation of stress fiber assembly →+0.184+4.040<.001<.001312
BONEEstablishment of Golgi localization →+0.124+3.354<.001<.001312
BREASTPositive regulation of extracellular matrix organization →+0.142+2.898.001<.001311
LUNG_NSCLC_LUSCAV node cell action potential →-1.362-3.215.001.001311
LUNG_NSCLC_LUSCAV node cell to bundle of His cell signaling →-1.362-3.215.001.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,375 associations by consensus.

Neuroligin clustering involved in postsynaptic membrane assembly by CDH2 expression — PANCREAS

Box plot of Neuroligin clustering involved in postsynaptic membrane assembly in CDH2-low vs CDH2-high samples in PANCREAS.

Explore this box plot interactively →

Exploration