CDH13

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH13 mutation is significantly associated with the total protein of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDH13-associated genes across cancer lineages are FOXO3a_pS318_S321, p38-MAPK_pT180_Y182, and Rad50. Each is linked with CDH13 in more than 2 cancer types. Because this analysis shows association rather than direction, both CDH13-to-partner and partner-to-CDH13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FOXO3a_pS318_S321 grouped by CDH13-low versus CDH13-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH13→partner) and Y-score (partner→CDH13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFOXO3a_pS318_S321 →-0.110-1.279.002.02133
UCECp38-MAPK_pT180_Y182 →-0.442-1.227<.001.01533
UCECRad50 →-0.189-1.637.007.00133
UCEC4E-BP1 →+0.246+1.877.002.00433
UCECeEF2 →+0.281+1.241.007.01532
UCECNotch1 →+0.137+1.672<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

FOXO3a_pS318_S321 by CDH13 expression — UCEC

Box plot of FOXO3a_pS318_S321 in CDH13-low vs CDH13-high samples in UCEC.

Explore this box plot interactively →

Exploration