CDH13

Across TCGA cell cohorts, CDH13 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,029 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible CDH13-associated GO terms across cancer lineages are Collagen biosynthetic process, Positive regulation of intracellular transport, and Positive regulation of extracellular matrix organization. Each is linked with CDH13 in more than 8 cancer types. Because this analysis shows association rather than direction, both CDH13-to-partner and partner-to-CDH13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Collagen biosynthetic process grouped by CDH13-low versus CDH13-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH13→partner) and Y-score (partner→CDH13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Collagen biosynthetic process →	+0.327	+3.885	<.001	<.001	3	9
BONE	Positive regulation of intracellular transport →	+0.083	+4.470	<.001	<.001	3	9
KIDNEY	Positive regulation of extracellular matrix organization →	+0.130	+2.548	<.001	.003	3	9
BONE	Transport of virus →	+0.135	+2.956	.001	.003	3	8
BONE	Negative regulation of fibrinolysis →	+0.282	+3.136	.003	.002	3	8
OESOPHAGUS	Low-density lipoprotein particle mediated signaling →	-0.343	-2.821	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,029 associations by consensus.

Collagen biosynthetic process by CDH13 expression — BONE

Explore this box plot interactively →