CDH1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDH1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,703 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDH1-associated proteins across cancer lineages are ESRP2, CTNNA1, and ERBB3_S686. Each is linked with CDH1 in more than 7 cancer types. Because this analysis shows association rather than direction, both CDH1-to-partner and partner-to-CDH1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDH1 versus ESRP2 in HNSC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH1→partner) and Y-score (partner→CDH1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCESRP2 →+0.624+0.804<.001<.00138
HNSCCTNNA1 →+0.378+0.810<.001<.00137
GBMERBB3_S686 →+0.729+0.803<.001.00136
BRCAESRP2_S573 →+0.555+1.068.001.00636
LUADAP1M2 →+0.379+0.587<.001<.00136
GBMNNMT →-1.209-0.899<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,703 associations by consensus.

CDH1 vs ESRP2 — HNSC

Per-sample scatter of CDH1 vs ESRP2 in HNSC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration