CDC42SE1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDC42SE1 mutation is significantly associated with the RNA expression of many other genes, with 1,518 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDC42SE1-associated genes across cancer lineages are IGKV1OR2-118, SRXN1, and CCL5. Each is linked with CDC42SE1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDC42SE1-to-partner and partner-to-CDC42SE1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDC42SE1→partner) and Y-score (partner→CDC42SE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIGKV1OR2-118 →+0.236+2.718.002.00131
UCECSRXN1 →+0.628+3.638.001.00131
UCECCCL5 →+1.303+3.606.002.00131
UCECRBAK-RBAKDN →+0.112+2.405<.001.00431
UCECMIR6075 →+0.384+3.415<.001<.00131
UCECRNA5SP414 →+0.766+3.032<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,518 associations by consensus.

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