CDC42EP3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDC42EP3 mutation is significantly associated with the total protein of many other genes, with 30 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDC42EP3-associated genes across cancer lineages are PKC-delta_pS664, ATM, and 14-3-3_beta. Each is linked with CDC42EP3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDC42EP3-to-partner and partner-to-CDC42EP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PKC-delta_pS664 grouped by CDC42EP3-low versus CDC42EP3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDC42EP3→partner) and Y-score (partner→CDC42EP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPKC-delta_pS664 →-0.097-1.874.024.04932
UCECATM →-0.773-2.807<.001<.00132
UCEC14-3-3_beta →-0.105-2.673.003.00531
UCECeIF4E →+0.198+2.807.008<.00131
UCECeIF4G →+0.320+3.584.004.00231
UCECFoxM1 →+0.267+2.710.004.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 30 associations by consensus.

PKC-delta_pS664 by CDC42EP3 expression — UCEC

Box plot of PKC-delta_pS664 in CDC42EP3-low vs CDC42EP3-high samples in UCEC.

Explore this box plot interactively →

Exploration