CDC42BPA

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDC42BPA protein abundance is significantly associated with the RNA expression of many other genes, with 13,469 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible CDC42BPA-associated genes across cancer lineages are MYL9, C1QTNF7, and RECK. Each is linked with CDC42BPA in more than 7 cancer types. Because this analysis shows association rather than direction, both CDC42BPA-to-partner and partner-to-CDC42BPA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDC42BPA versus MYL9 in COAD, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDC42BPA→partner) and Y-score (partner→CDC42BPA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMYL9 →+1.176+0.287<.001<.00138
CCRCCC1QTNF7 →+1.167+0.303<.001<.00137
UCECRECK →+0.721+0.301<.001<.00137
UCECCNN1 →+1.976+0.351.001.00237
PDACPPFIA2 →+0.807+0.299<.001<.00137
PDACRBMS3 →+0.729+0.259<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,469 associations by consensus.

CDC42BPA vs MYL9 — COAD

Per-sample scatter of CDC42BPA vs MYL9 in COAD (Pearson r = 0.40).

Explore this scatter interactively →

Exploration