CDC23

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDC23 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,597 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CDC23-associated proteins across cancer lineages are KDM3B, HSPA4, and UBAP2L_S609. Each is linked with CDC23 in more than 6 cancer types. Because this analysis shows association rather than direction, both CDC23-to-partner and partner-to-CDC23 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDC23 versus KDM3B in HNSC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDC23→partner) and Y-score (partner→CDC23) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCKDM3B →+0.325+0.640<.001<.00137
OVHSPA4 →+0.317+0.501<.001<.00137
UCECUBAP2L_S609 →+0.422+0.344.001.00236
LUADUBR7 →+0.316+0.262<.001.00536
GBMRBM22 →+0.326+0.340<.001<.00136
OVPHAX →+0.342+0.338<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,597 associations by consensus.

CDC23 vs KDM3B — HNSC

Per-sample scatter of CDC23 vs KDM3B in HNSC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration