CDC23

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDC23 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,271 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CDC23-associated GO terms across cancer lineages are Protein localization to chromosome, centromeric region, Protein import into nucleus, and Negative regulation of chromosome segregation. Each is linked with CDC23 in more than 16 cancer types. Because this analysis shows association rather than direction, both CDC23-to-partner and partner-to-CDC23 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein localization to chromosome, centromeric region grouped by CDC23-low versus CDC23-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CDC23→partner) and Y-score (partner→CDC23) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASProtein localization to chromosome, centromeric region →+0.143+0.805<.001<.001317
LIVERProtein import into nucleus →+0.096+0.902<.001<.001317
PANCREASNegative regulation of chromosome segregation →+0.123+0.702<.001<.001316
URINARY_TRACTRegulation of G2/M transition of mitotic cell cycle →+0.080+0.535.004.008316
OESOPHAGUSRegulation of mitotic sister chromatid segregation →+0.173+0.748.001.003217
PANCREASProtein localization to kinetochore →+0.156+0.728<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,271 associations by consensus.

Protein localization to chromosome, centromeric region by CDC23 expression — PANCREAS

Box plot of Protein localization to chromosome, centromeric region in CDC23-low vs CDC23-high samples in PANCREAS.

Explore this box plot interactively →

Exploration