CD99

Across TCGA patient cohorts, CD99 protein abundance is significantly associated with the RNA expression of many other genes, with 12,631 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CD99-associated genes across cancer lineages are PDE1A, SPARC, and GLT8D2. Each is linked with CD99 in more than 6 cancer types. Because this analysis shows association rather than direction, both CD99-to-partner and partner-to-CD99 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CD99 versus PDE1A in OV, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CD99→partner) and Y-score (partner→CD99) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	PDE1A →	+1.530	+1.189	<.001	<.001	3	7
BRCA	SPARC →	+1.284	+0.506	<.001	<.001	3	7
BRCA	GLT8D2 →	+1.233	+0.468	<.001	<.001	3	7
BRCA	SERPINF1 →	+1.200	+0.608	<.001	<.001	3	7
UCEC	SGCD →	+1.181	+0.417	.001	.005	3	7
BRCA	BNC2 →	+0.924	+0.539	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,631 associations by consensus.

CD99 vs PDE1A — OV

Explore this scatter interactively →