CD9

Across TCGA patient cohorts, CD9 protein abundance is significantly associated with the RNA expression of many other genes, with 11,119 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CD9-associated genes across cancer lineages are LPCAT3, SLA, and CD3G. Each is linked with CD9 in more than 5 cancer types. Because this analysis shows association rather than direction, both CD9-to-partner and partner-to-CD9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CD9 versus LPCAT3 in OV, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CD9→partner) and Y-score (partner→CD9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	LPCAT3 →	+0.819	+0.980	<.001	<.001	3	6
OV	SLA →	-0.866	-0.697	.003	.002	3	5
HNSC	CD3G →	-0.902	-0.629	.002	.003	3	5
OV	CLEC4E →	-1.188	-0.787	<.001	.005	3	5
HNSC	RIPOR3 →	-0.718	-0.800	<.001	<.001	3	5
OV	TNFRSF9 →	-1.046	-0.924	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,119 associations by consensus.

CD9 vs LPCAT3 — OV

Explore this scatter interactively →