CD74

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CD74 mutation is significantly associated with the total protein of many other genes, with 11 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CD74-associated genes across cancer lineages are Ku80, PCNA, and Caspase-7-cleavedD198. Each is linked with CD74 in more than 1 cancer types. Because this analysis shows association rather than direction, both CD74-to-partner and partner-to-CD74 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by CD74-low versus CD74-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CD74→partner) and Y-score (partner→CD74) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.310+3.183.006.00931
UCECPCNA →+0.272+2.459.009.02031
UCECCaspase-7-cleavedD198 →+0.866+2.459.002.02031
UCECCaspase-8 →-0.248-2.973.041.03531
UCEC4E-BP1 →+0.339+3.029.009.01831
UCECCyclin-B1 →+0.694+2.459.010.02031
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

Ku80 by CD74 expression — UCEC

Box plot of Ku80 in CD74-low vs CD74-high samples in UCEC.

Explore this box plot interactively →

Exploration