CD74

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CD74 mutation is significantly associated with the mutation status of many other genes, with 2,768 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CD74-associated genes across cancer lineages are ELMO3, TLX1, and USP21. Each is linked with CD74 in more than 2 cancer types. Because this analysis shows association rather than direction, both CD74-to-partner and partner-to-CD74 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ELMO3 grouped by CD74-low versus CD74-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CD74→partner) and Y-score (partner→CD74) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEELMO3 →+3.350+4.584.003.00313
BLOOD_LeukemiaTLX1 →+4.560+4.309.007.00713
BLOOD_LeukemiaUSP21 →+3.560+4.247.002.00213
BLOOD_LeukemiaSLC39A1 →+4.560+4.309.007.00713
LARGE_INTESTINEMAML1 →+3.087+4.392.005.00513
BLOOD_LeukemiaLMOD1 →+5.560+4.736.003.00313
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,768 associations by consensus.

ELMO3 by CD74 expression — LARGE_INTESTINE

Box plot of ELMO3 in CD74-low vs CD74-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration