CD48

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CD48 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of CD48’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where CD48 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CD48 is over-expressed in tumor, although a few such as COAD and LUSC show the opposite, repressed pattern.

KIRC, COAD, and LUSC are the cancer types where CD48 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CD48 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+2.348<.00112view →
COADAllIII,IV−1.543<.00111view →
LUSCMaleIII,IV−2.637<.0018view →
BLCAAllAll−1.167.0056view →
LUADAllII,III,IV−0.614.0105view →
BRCAAllAll+0.386.0054view →
KICHAllII,III,IV−0.985.0043view →
KIRPAllAll+0.913.0023view →
READAllAll−1.339.0312view →
UCECAllAll−0.895<.0012view →
THCAAllAll−0.622.0312view →
THCAMaleIV+1.189.0091view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

CD48–KIRC

Tumor-vs-normal expression box plot for CD48 RNA in KIRC.

Open the KIRC breakdown →

Exploration