CD38

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CD38 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible CD38-associated genes across cancer lineages are C10orf53, MROH9, and SPATA3. Each is linked with CD38 in more than 1 cancer types. Because this analysis shows association rather than direction, both CD38-to-partner and partner-to-CD38 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C10orf53 grouped by CD38-low versus CD38-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CD38→partner) and Y-score (partner→CD38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEC10orf53 →+0.024+5.217<.001<.00131
LUNG_NSCLC_LUADMROH9 →+0.303+4.371<.001.00531
LUNG_NSCLC_LUADSPATA3 →+0.009+4.662<.001.00531
LUNG_NSCLC_LUADOR2V2 →+0.038+4.544<.001.00331
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

C10orf53 by CD38 expression — LARGE_INTESTINE

Box plot of C10orf53 in CD38-low vs CD38-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration