CD248

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CD248 mutation is significantly associated with the RNA expression of many other genes, with 2,153 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CD248-associated genes across cancer lineages are MED28P6, MIR7702, and FAM177A1. Each is linked with CD248 in more than 2 cancer types. Because this analysis shows association rather than direction, both CD248-to-partner and partner-to-CD248 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MED28P6 grouped by CD248-low versus CD248-high in GBM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CD248→partner) and Y-score (partner→CD248) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMED28P6 →+0.213+5.149.003.00733
UCECMIR7702 →+0.214+4.153<.001.00533
UCECFAM177A1 →+0.386+3.354.005.00532
UCECPELO →+0.434+2.233.009.00632
UCECEME1 →+0.719+2.917<.001.00132
UCECBUB1B →+0.813+3.708.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,153 associations by consensus.

MED28P6 by CD248 expression — GBM

Box plot of MED28P6 in CD248-low vs CD248-high samples in GBM.

Explore this box plot interactively →

Exploration